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Institute of Genomics and Integrative Biology

The expression status of fifteen most constant housekeeping genes present in all the chips

Genea

Description

Function

Meanb

CVb

(TG/CA)n Repeats c

PAK4

p21(CDKN1A)-activated kinase 4

Signaling and Communication

2.02449

0

-

TUBB4

tubulin, beta, 4

Structure and Motility

2.39345

0.00622

-

MPG

N-methylpurine-DNA glycosylase

Information

2.5201

0.00622

-

TIMM44

translocase of inner mitochondrial membrane 44 homolog (yeast)

Signaling and Communication

2.41242

0.01368

-

TUFM

Tu translation elongation factor, mitochondrial

Information

3.09732

0.01596

-

PIM1

pim-1 oncogene

Signaling and Communication

3.19197

0.01628

-

HAX1

HS1 binding protein

Structure and Motility

3.19688

0.0167

-

PSMB2

proteasome (prosome, macropain) subunit, beta type, 2

Metabolism

3.06003

0.01705

-

CCT7

chaperonin containing TCP1, subunit 7 (eta)

Information

2.96456

0.01745

-

AGPAT1

1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)

Metabolism

3.12033

0.01796

-

PRKCABP

protein kinase C, alpha binding protein

Signaling and Communication

2.64002

0.01868

-

BANF1

barrier to autointegration factor 1

UNKNOWN

3.30764

0.01969

-

DDT

D-dopachrome tautomerase

Metabolism

2.77804

0.01976

-

PPP1R11

protein phosphatase 1, regulatory (inhibitor) subunit 11

UNKNOWN

3.11242

0.01984

-

NME1

non-metastatic cells 1, protein (NM23A)

Information

2.175916

0.019871

-

a: HUGO symbols of the genes are shown. The genes are arranged in increasing order of CV (coefficient of variation) from top.

b : Mean expression levels and CV (SD/Mean) across 9 gene chip experiments were computed as described in methods.

c: Only long repeats n ³ 12 were scored ; ‘-‘ indicates absence of intragenic (TG/CA)n (n ³ 12) repeats.

 

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